Microbial Biotechnology

Molecular Biology and Genetics

Electronic Journal of Biotechnology ISSN: 0717-3458 Vol. 7 No. 3, Issue of December 15, 2004
© 2004 by Pontificia Universidad Católica de Valparaíso -- Chile Received January 20, 2004 / Accepted May 26, 2004
REVIEW ARTICLE

Mechanisms and roles of the RNA-based gene silencing

Snehasis Jana
Department of Biochemical Engineering and Biotechnology
Indian Institute of Technology
New Delhi, India
Tel: 91 9811242269
E-mail: janasnehasis@rediffmail.com

Chiranjib Chakraborty*
Glenmark Laboratories Pvt. Ltd
C-33, Nizzamuddin East
New Delhi-110013
Tel: 91 11 24356713 / 24319568
Fax: 91 11 24356712
E-mail: drchiranjib@yahoo.com

Shyamsundar Nandi
Department of Biochemical Engineering and Biotechnology
Indian Institute of Technology
New Delhi, India
Tel: 91 9891330083
E-mail: nandibiotech@yahoo.co.in

*Corresponding author

Keywords: double stranded RNA, post-transcriptional gene silencing, RNA interference, transcriptional gene silencing.

Abstract
Full Text

RNA silencing is a remarkable type of gene regulation. This process has been found to occur in many different organisms such as plants (co-suppression), fungi (quelling), and animals (RNA interference; RNAi). Double-stranded RNA (dsRNA) is a potent trigger in RNA silencing mechanisms operating in a wide range of organisms. This mechanism recognizes dsRNA and processes them into small 21-25nt RNAs (smRNAs). Small RNAs can guide post-transcriptional degradation of complementary messenger RNAs and in plants, transcriptional gene silencing is occurred by methylation of homologous DNA sequences. In plants, it serves as an antiviral defense, and many plant viruses encode suppressors of silencing such as helper component-proteinase of potyviruses (HC-Pro) and the p25 protein encoded by potato virus X (PVX). HC-Pro acts by preventing accumulation of smRNAs that provide specificity determinant for homologous RNA degradation, but p25 viral protein acts by targeting the mobile silencing signal. The encouraging view is that RNA silencing is part of a sophisticated network of interconnected pathways for cellular defense and development and that it may become a powerful tool to manipulate gene expression experimentally.


Supported by UNESCO / MIRCEN network
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