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Molecular Biology
and Genetics
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Plant
Biotechnology |
| EJB Electronic Journal of Biotechnology
ISSN: 0717-3458 |
| © 2001 by Universidad
Católica de Valparaíso -- Chile |
Analysis of
Uruguayan weedy rice genetic diversity using AFLP molecular
markers
María
Teresa Federici*
Unit of Biotechnology
National Institute of Agronomical Research
Experimental Station "Las Brujas"
Ruta 48. Km. 10. Rincón del Colorado. Canelones, Uruguay
Tel: 598-2-0327-7641
Fax: 598-2-0327-7609
E- mail: maritefe@inia.org.uy
Duncan
Vaughan
Crop Evolutionary Dynamics
Laboratory
National Institute of Agrobiological Resources (NIAR)
Kannondai 2- 1- 2, Tsukuba, Ibaraki, 305, Japan
Tel: 81-298-38-7406
Fax: 81- 298- 38-7408
E- mail: duncan@abr.affrc.go.jp
Norihiko
Tomooka
Crop Evolutionary Dynamics
Laboratory
National Institute of Agrobiological Resources (NIAR)
Kannondai 2- 1- 2, Tsukuba, Ibaraki, 305, Japan
Tel: 81-298-38-7406
Fax: 81- 298- 38-7408
E-mail: tomooka@affrc.go.jp
Akita
Kaga
Crop Evolutionary Dynamics
Laboratory
National Institute of Agrobiological Resources (NIAR)
Kannondai 2- 1- 2, Tsukuba, Ibaraki, 305, Japan
Tel: 81-298-38-7406
Fax: 81- 298- 38-7408
E-mail: kaga@affrc.go.jp
Xin
Wang Wang
Crop Evolutionary Dynamics
Laboratory
National Institute of Agrobiological Resources (NIAR)
Kannondai 2- 1- 2, Tsukuba, Ibaraki, 305, Japan
Tel: 81-298-38-7406
Fax: 81- 298- 38-7408
E-mail: xwang1@nias.affrc.go.jp
Koji
Doi
Crop Evolutionary Dynamics
Laboratory
National Institute of Agrobiological Resources (NIAR)
Kannondai 2- 1- 2, Tsukuba, Ibaraki, 305, Japan
Tel: 81-298-38-7406
Fax: 81- 298- 38-7408
E-mail: kdoi@affrc.go.jp
Marta
Francis
Unit of Biotechnology
National Institute of Agronomical Research
Experimental Station "Las Brujas"
Ruta 48. Km. 10. Rincón del Colorado. Canelones, Uruguay
Tel: 598-2-0327-7641
Fax: 598-2-0327-7609
E-mail: mfrancis@inia.org.uy
Gonzalo
Zorrilla
National Institute of
Agronomical Research (INIA)
Experimental Station "Treinta y Tres"
Coronel J. Arenas 1986. Treinta y Tres, Uruguay
Tel: 598-2-0452-2305
Fax: 598-2-0452-5701
E- mail: zorrilla@inia.org.uy
Nestor
Saldain
National Institute of
Agronomical Research (INIA)
Experimental Station "Treinta y Tres"
Coronel J. Arenas 1986. Treinta y Tres, Uruguay
Tel: 598-2-0452-2305
Fax: 598-2-0452-5701
E-mail: nsaldain@inia.org.uy
* Corresponding
author
Financial
support: Japan Cooperation Agency
(JICA)- Individual Training.
Keywords:
clusters, dendrograms,
polymorphic bands, red rice, population dynamics.
Red rice has always occurred
in Uruguayan rice fields at low population levels. Over the last 10
years, the intercropping period was reduced due to more intensive rice
production. At the same time, red rice populations and the number of
infested rice fields have increased becoming a serious rice production
problem.
-
Panicles of different
red rice biotypes were collected from rice fields across Uruguay
(Table 1, Figure
1), individual plants of each type were transplanted in the
field and records of morphological traits used as variety descriptors
were taken on a single plant basis.
There was a clear relationship
between AFLP groups and morphological characters. Three diferentiated
clusters appeared in both dendrograms (Figure 2,
Figure 3, Figure 4).
Wild type traits, such as, black hull, purple apex and long awn were
found in most of the samples in group A, whereas traits found in cultivated
rice were found in the weedy rice of group B and C (straw hull and apex
and short or no awn). Cluster B included all the cultivars analyzed
and some weedy accesions (Figure 5).
-
A hypothesis to
explain the evolution of weedy rice in Uruguay is presented here.
It is suggested that at different times there has been selection
for shattering and subsequently disruptive selection for either
wild or domestication traits, (Figure 6).
-
It appears that
weedy rice has two strategies for survival: adapting to natural
(Group A) or cultivated environment (Groups B, C), (Figure
6).
-
Weedy rice is still
evolving through hybridization- differentiation cycles with cultivars
which resulted in intemediate types, (Figure 5).
-
A clear relationship
was found between AFLP groups and morphological characters while
no relation was found between geographical origin of samples and
genetic diversity, (Figure 5).
Saghai-Maroof,
K.; Soliman, M.; Jorgensen, R.A. and Allard, R.W. (1984). Ribosomal
DNA Spacer-Length Polymorphisms in Barley: Mendelian Inheritance, Chromosomal
Location, and Population Dynamics. Proceedings of the National Academy
of Sciences of the United States of America 81:8014-8018.
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