Table 1. Characteristics of oligonucleotides used in degenerate and inverse PCR reactions

Primer

 

bp

Sequence 5' - 3'

Tma (° C)

%GC

IPGIPL

IPGIPR

AP-PGIP-INVL

AP-PGIP-INVR

AP-PGIP-INVL-2

AP-PGIP-INVR-2

23

24

25

25

22

21

CGAATTCC(C/A)GC(C/T)AT(C/T)GC(T/C)AA(A/G)CT

CAGGATCC(C/T)TC(C/G)AGC(A/T)TGTT(C/A)CG(A/T)

AGACCGCAATAAGCTCACAGGTCAT

AGGTTCTTGAGTTGGCTGAGGAAGT

ACCTCATTCGCTCAGATGGACT

TAGGTATTGCATTCGGCCTCG

 

NDb

ND

74

74

66

64

ND

ND

48

48

50

52

a – Tm calculated using formula: Tm = 4(GC) + 2(AT)

b – ND, not determined

Supported by UNESCO / MIRCEN network
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