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| Table 3. Expected and observed heterozygosity (HE and HO respectively), effective number of alleles (ae), HW deviation significance, and PIC of eleven microsatellite markers used in Charolais cattle. |
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Locus1 |
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1 |
2 |
3 |
4 |
5 |
6 |
7 |
8 |
9 |
10 |
11 |
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Subpopulation 1 |
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n2 = 1/79 |
HE |
0.804 |
0.485 |
0.761 |
0.800 |
0.741 |
0.911 |
0.631 |
0.555 |
0.870 |
0.665 |
0.671 |
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HO |
0.520 |
0.000 |
0.592 |
0.780 |
0.755 |
0.680 |
0.388 |
0.560 |
0.469 |
0.688 |
0.532 |
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HW3 |
*** |
*** |
** |
NS |
NS |
NS |
*** |
NS |
*** |
** |
NS |
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|
ae |
4.901 |
1.922 |
4.046 |
4.812 |
3.757 |
10.163 |
2.660 |
2.218 |
7.224 |
2.927 |
2.976 |
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PIC |
0.769 |
0.426 |
0.712 |
0.760 |
0.712 |
0.893 |
0.546 |
0.453 |
0.849 |
0.605 |
0.627 |
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Subpopulation 2 |
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n = 8/45 |
HE |
0.834 |
0.651 |
0.807 |
0.774 |
0.757 |
0.885 |
0.663 |
0.769 |
0.891 |
0.880 |
0.843 |
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HO |
0.410 |
0.235 |
0.605 |
0.514 |
0.636 |
0.714 |
0.436 |
0.816 |
0.649 |
0.167 |
0.344 |
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HW |
*** |
*** |
*** |
** |
NS |
** |
** |
NS |
*** |
*** |
*** |
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ae |
5.675 |
2.792 |
4.920 |
4.224 |
3.924 |
7.851 |
2.891 |
4.150 |
8.246 |
7.557 |
5.884 |
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PIC |
0.803 |
0.578 |
0.768 |
0.732 |
0.719 |
0.860 |
0.590 |
0.728 |
0.867 |
0.854 |
0.809 |
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Subpopulation 3 |
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n = 17/63 |
HE |
0.781 |
0.404 |
0.846 |
0.783 |
0.755 |
0.880 |
0.577 |
0.788 |
0.877 |
0.834 |
0.813 |
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HO |
0.253 |
0.093 |
0.636 |
0.6 |
0.732 |
0.493 |
0.44 |
0.663 |
0.558 |
0.257 |
0.467 |
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HW |
*** |
*** |
*** |
*** |
NS |
*** |
*** |
*** |
*** |
*** |
*** |
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|
ae |
4.467 |
1.670 |
6.253 |
4.498 |
3.992 |
7.909 |
2.344 |
4.611 |
7.616 |
5.713 |
5.197 |
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PIC |
0.744 |
0.356 |
0.820 |
0.743 |
0.727 |
0.863 |
0.483 |
0.748 |
0.856 |
0.804 |
0.784 |
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Population |
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n = 26/187 |
HE |
0.802 |
0.700 |
0.820 |
0.827 |
0.751 |
0.901 |
0.420 |
0.667 |
0.549 |
0.369 |
0.461 |
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HO |
0.369 |
0.096 |
0.616 |
0.636 |
0.719 |
0.608 |
0.420 |
0.667 |
0.549 |
0.369 |
0.461 |
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HW |
** |
** |
** |
** |
NS |
** |
** |
** |
** |
** |
** |
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ae |
4.981 |
3.310 |
5.476 |
5.702 |
3.977 |
9.843 |
2.896 |
3.932 |
9.922 |
7.522 |
4.700 |
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PIC |
0.773 |
0.665 |
0.793 |
0.803 |
0.751 |
0.901 |
0.657 |
0.748 |
0.891 |
0.854 |
0.762 |
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