Electronic Journal of Biotechnology ISSN: 0717-3458
  © 2000 by Universidad Católica de Valparaíso -- Chile
Vol. 3 No. 3, Issue of December 15, 2000
 


Table 1. Combinations of transcription factor binding sites for C. elegans, human chromosome 22, yeast, archaea, bacteria, and virus.

Genome Name

Total Repeat Sequences

Match One

No Match

More Than One Match

Average Factors

Ratio

C. elegans

454927

73881

29962

351084

4.8

77.17%

Human chromosome 22

1347364

47159

22211

1277994

7.6

94.85%

Yeast

4329

305

338

3686

22.5

85.14%

Bsub

700

73

27

600

11.5

85.71%

Hinf

788

93

55

640

7.3

81.22%

Hpyl

713

98

25

590

8.3

82.75%

Hpyl99

721

88

33

600

6.3

83.22%

Mgen

373

26

16

331

6.7

88.74%

Mtub

4932

784

171

3977

5.1

80.64%

E. coli

1897

188

60

1649

8.8

86.93%

CP

135

14

8

113

7.3

83.70%

MP

1282

107

36

1139

7.5

88.85%

RP

98

8

2

88

5.8

89.80%

TP

102

7

4

91

15.3

89.22%

AP

398

62

7

329

7.4

82.66%

AR

779

48

21

710

7.8

91.42%

PA

277

20

4

253

5.1

91.34%

PH

401

17

4

380

6.5

94.76%

AA

299

20

7

272

6.9

90.97%

CT

27

4

1

22

14.5

81.48%

S

1580

78

34

1468

9.1

92.91%

TM

518

24

14

480

7.0

92.66%

UU

302

31

9

262

6.2

86.75%


Supported by UNESCO / MIRCEN network